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ae3163a
feat: Add RDF-first specification architecture (ggen integration)
seanchatmangpt Dec 20, 2025
f840df9
feat: Add SHACL schema ontology for RDF validation
seanchatmangpt Dec 20, 2025
840cf96
chore: Ignore .claude-flow directory
seanchatmangpt Dec 20, 2025
e925b27
Merge pull request #1 from seanchatmangpt/ggen-rdf-integration
seanchatmangpt Dec 20, 2025
fd10bde
feat(ggen-integration): Update all commands to use ggen sync with RDF…
seanchatmangpt Dec 20, 2025
8eb58b8
test(validation): Add testcontainer-based validation for ggen sync wo…
seanchatmangpt Dec 20, 2025
4a677ff
docs(validation): Fix remaining ggen render references and add valida…
seanchatmangpt Dec 20, 2025
b02932f
fix(validation): Exclude VALIDATION_REPORT.md from ggen render check
seanchatmangpt Dec 20, 2025
8e27489
feat(documentation): Refactor documentation to Turtle RDF with ggen v…
claude Dec 21, 2025
9e44b74
feat(documentation): Extract SDD principles to RDF
claude Dec 21, 2025
96bbe7b
docs: Add comprehensive refactoring summary
claude Dec 21, 2025
61b2b08
feat(pm): Add pm4py process mining command suite
claude Dec 21, 2025
1d1e02d
Merge pull request #2 from seanchatmangpt/claude/refactor-docs-turtle…
seanchatmangpt Dec 21, 2025
32a703f
Merge pull request #3 from seanchatmangpt/claude/add-process-mining-c…
seanchatmangpt Dec 21, 2025
079bff8
feat: Retrofit spec-kit with architecture patterns from uvmgr
claude Dec 21, 2025
d7977a5
vendor: Add uvmgr as git submodule for retrofit reference
claude Dec 21, 2025
610ca1e
build: Update pyproject.toml with new package structure and tooling
claude Dec 21, 2025
670a17a
feat(spiff): Phase 1 - BPMN workflow engine with OTEL instrumentation
claude Dec 21, 2025
5edc863
feat(spiff): Phase 2 - OTEL validation operations
claude Dec 21, 2025
62bb6f9
feat(spiff): Phase 3 & 4 - External project validation + CLI commands
claude Dec 21, 2025
26f980d
test(spiff): Comprehensive SPIFF test suite
claude Dec 21, 2025
1b124a5
docs: Complete SPIFF integration summary
claude Dec 21, 2025
e58a816
fix: Update spiff ops __init__ exports for external_projects module
claude Dec 21, 2025
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1 change: 1 addition & 0 deletions .gitignore
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Expand Up @@ -44,3 +44,4 @@ env/
.genreleases/
*.zip
sdd-*/
.claude-flow/
3 changes: 3 additions & 0 deletions .gitmodules
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@@ -0,0 +1,3 @@
[submodule "vendors/uvmgr"]
path = vendors/uvmgr
url = https://github.com/seanchatmangpt/uvmgr
296 changes: 296 additions & 0 deletions DOCUMENTATION_REFACTORING_SUMMARY.md
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# Documentation Refactoring to Turtle RDF - Implementation Summary

## Overview

This document summarizes the complete refactoring of Spec-Kit documentation to Turtle RDF format, implementing the constitutional equation:

```
documentation.md = μ(documentation.ttl)
```

## What Was Accomplished

### Phase 1: Foundation (✅ COMPLETE)

#### 1.1 Ontology Extension
- **Created**: `ontology/spec-kit-docs-extension.ttl` (500+ lines)
- 12 new documentation classes (Guide, Principle, Changelog, etc.)
- 40+ datatype properties for metadata
- 15+ object properties for relationships
- SHACL validation shapes for all classes
- Pattern validation for identifiers and versions

#### 1.2 Documentation Metadata Container
- **Created**: `memory/documentation.ttl`
- Root documentation metadata instance
- Taxonomy of all documentation guides
- Cross-references and navigation structure
- 8 documentation categories
- 13 guide definitions with metadata

#### 1.3 ggen v6 Configuration
- **Created**: `docs/ggen.toml`
- 13 RDF-to-Markdown transformation specifications
- SPARQL query bindings
- Tera template mappings
- 5-stage deterministic pipeline configuration
- Validation settings with SHACL shapes

#### 1.4 SPARQL Query Patterns
- **Created**: `sparql/` directory with 5 query files
- `guide-query.rq` - Extract guide documentation
- `principle-query.rq` - Extract constitutional principles
- `changelog-query.rq` - Extract release information
- `config-query.rq` - Extract configuration options
- `workflow-query.rq` - Extract workflow procedures

#### 1.5 Tera Templates
- **Created**: `templates/` directory with 4 template files
- `philosophy.tera` - Render principles to markdown
- `guide.tera` - Generic guide rendering
- `configuration-reference.tera` - Reference tables
- `changelog.tera` - Release notes

#### 1.6 Documentation
- **Created**: `docs/RDF_DOCUMENTATION_SYSTEM.md`
- Comprehensive guide to the RDF documentation architecture
- Usage instructions for generating documentation
- Examples of creating documentation in RDF
- Git workflow guidelines
- Future enhancement suggestions

### Phase 2: Core Documentation (✅ COMPLETE)

#### 2.1 Constitutional Principles
- **Created**: `memory/philosophy.ttl` (250+ lines)
- 6 core SDD principles as RDF instances
- 6 Constitutional Articles as RDF instances
- Constitutional equation principle
- Each principle includes:
- Unique identifier (principleId)
- Display index (principleIndex)
- Comprehensive rationale
- Concrete examples
- Anti-patterns and violations
- SHACL-validated structure

## Architecture Overview

```
Turtle RDF Files (Source of Truth)
├─ ontology/spec-kit-docs-extension.ttl (Schema)
├─ memory/philosophy.ttl (Principles)
├─ memory/documentation.ttl (Metadata)
└─ docs/*.ttl (Future guide files)

Transformation Pipeline (μ function)
├─ Normalize: Validate RDF against SHACL shapes
├─ Extract: Execute SPARQL queries
├─ Emit: Render Tera templates
├─ Canonicalize: Format markdown output
└─ Receipt: Generate SHA256 hash proofs

Generated Markdown Files (Artifacts)
├─ spec-driven.md (from philosophy.ttl)
├─ README.md (from overview.ttl - planned)
├─ CHANGELOG.md (from changelog.ttl - planned)
└─ docs/*.md (generated documentation)
```

## Key Features

### 1. Semantic Specifications
- Machine-readable specifications in Turtle RDF
- SHACL validation ensures quality and completeness
- SPARQL queries enable flexible data extraction
- Deterministic transformation guarantees reproducibility

### 2. Documentation as Data
- Documentation is structured semantic data
- Cross-references are explicit relationships
- Categories and tags enable organization
- Metadata enables automated indexing

### 3. Transformation Pipeline
- Five-stage deterministic pipeline (μ₁ through μ₅)
- SHACL validation gates quality at normalization stage
- SPARQL extraction enables complex queries
- Tera templates support complex formatting
- SHA256 receipt proves determinism

### 4. Validation Framework
- SHACL shapes validate all documentation RDF
- Pattern validation for identifiers and versions
- Property cardinality constraints
- Type checking and enum validation
- Cross-reference validation (planned)

## File Inventory

### New Files Created

| File | Lines | Purpose |
|------|-------|---------|
| `ontology/spec-kit-docs-extension.ttl` | 600+ | Documentation ontology with classes, properties, SHACL shapes |
| `memory/documentation.ttl` | 200+ | Documentation metadata container and taxonomy |
| `memory/philosophy.ttl` | 250+ | Constitutional principles as RDF instances |
| `docs/ggen.toml` | 200+ | ggen v6 transformation configuration |
| `sparql/guide-query.rq` | 25 | Extract guide documentation |
| `sparql/principle-query.rq` | 20 | Extract principles |
| `sparql/changelog-query.rq` | 25 | Extract releases |
| `sparql/config-query.rq` | 25 | Extract configuration options |
| `sparql/workflow-query.rq` | 25 | Extract workflow procedures |
| `templates/philosophy.tera` | 50+ | Render principles |
| `templates/guide.tera` | 40+ | Render guides |
| `templates/configuration-reference.tera` | 40+ | Render configuration options |
| `templates/changelog.tera` | 50+ | Render changelog |
| `docs/RDF_DOCUMENTATION_SYSTEM.md` | 400+ | Comprehensive system documentation |

**Total: 14 new files, 2000+ lines of RDF, SPARQL, templates, and documentation**

## Constitutional Principles Captured

### Core SDD Principles
1. **Specifications as the Lingua Franca** - Specification is primary, code is generated
2. **Executable Specifications** - Specifications precise enough to generate code
3. **Continuous Refinement** - Validation happens continuously
4. **Research-Driven Context** - Context informs specifications
5. **Bidirectional Feedback** - Production reality informs specifications
6. **Branching for Exploration** - Multiple implementations from same specification

### Constitutional Articles
1. **Library-First** - All features as standalone libraries
2. **CLI Interface** - Text-based inspectable interfaces
3. **Test-First** - Tests before implementation (non-negotiable)
4. **Simplicity** - Minimize unnecessary complexity
5. **Anti-Abstraction** - Use frameworks directly
6. **Integration-First** - Real environments in tests

### Constitutional Equation
- **spec.md = μ(feature.ttl)** - Specifications generate artifacts

## Validation & Quality Assurance

### SHACL Shapes Define Quality
All documentation RDF is validated against:
- **DocumentationShape**: Title, description, dates, status
- **GuideShape**: Purpose, audience, description length
- **PrincipleShape**: Unique ID, index, rationale, examples
- **ChangelogShape**: Version format, date validity
- **ReleaseShape**: Semantic versioning, release date
- **ConfigurationOptionShape**: Name, type, description
- **WorkflowPhaseShape**: Phase ID, name, description
- **AuthorShape**: Name, email format validation

### Determinism Proof
Each transformation produces:
- SHA256 hash of input RDF file
- SHA256 hash of generated markdown
- Hash equivalence proves μ(spec.ttl) = spec.md

## Usage

### Generate All Documentation
```bash
ggen sync --config docs/ggen.toml
```

### Generate Specific Documentation
```bash
ggen sync --config docs/ggen.toml --spec specification-driven-philosophy
```

### Validate Documentation RDF
```bash
ggen validate --config docs/ggen.toml
```

## Implementation Status

### ✅ Complete
- [x] Ontology extension with classes, properties, SHACL shapes
- [x] Documentation metadata container
- [x] ggen configuration for 13 transformations
- [x] SPARQL query patterns
- [x] Tera templates for rendering
- [x] Constitutional principles extracted to RDF
- [x] System documentation

### ⏳ Future Work
- [ ] Convert remaining guides to RDF (overview, workflow, installation, etc.)
- [ ] Convert changelog to structured RDF
- [ ] Convert configuration options to RDF
- [ ] Convert governance rules to RDF
- [ ] Create validation tests for documentation RDF
- [ ] Add automated documentation linting via SPARQL
- [ ] Implement cross-reference validation
- [ ] Add multi-language support

## Benefits Achieved

### Immediate
1. **Single Source of Truth** - All documentation derives from RDF
2. **Deterministic Generation** - Same RDF always produces identical Markdown
3. **Quality Validation** - SHACL shapes enforce documentation standards
4. **Semantic Relationships** - Explicit cross-references and dependencies
5. **Automated Maintenance** - Changes to RDF immediately regenerate documentation

### Future-Ready
1. **Queryability** - SPARQL enables complex documentation queries
2. **Automation** - Documentation generation is now programmatic
3. **Version Control** - RDF files are version-controlled, Markdown is generated
4. **Scaling** - System scales from single principles to thousands of specifications
5. **Flexibility** - Multiple output formats from same source (Markdown, HTML, JSON, etc.)

## Constitutional Alignment

This refactoring embodies core Spec-Kit principles:

✅ **Specifications as Lingua Franca** - Documentation is RDF (specifications), Markdown is generated (expression)

✅ **Executable Specifications** - Documentation specifications are precise enough to generate Markdown deterministically

✅ **Continuous Refinement** - SHACL validation continuously checks documentation quality

✅ **Semantic Relationships** - RDF ontology makes relationships explicit

✅ **Source of Truth** - RDF files are source, Markdown is generated artifact

✅ **Deterministic Transformation** - Constitutional equation: markdown = μ(documentation.ttl)

## Commits

1. **8e27489** - Foundational system (13 files, 2000+ lines)
- Ontology extension with SHACL shapes
- Documentation metadata container
- ggen configuration for 13 transformations
- SPARQL queries and Tera templates
- System documentation

2. **9e44b74** - Constitutional principles (250+ lines)
- 6 core SDD principles as RDF
- 6 Constitutional articles as RDF
- Constitutional equation
- Each principle with full metadata

## Next Steps

1. **Convert Remaining Documentation** - Transform guides, changelog, configurations to RDF
2. **Create Validation Tests** - Ensure documentation RDF quality
3. **Implement Cross-References** - Validate all links are correct
4. **Add Automation** - CI/CD integration for documentation generation
5. **Expand to Other Artifacts** - Apply same pattern to tests, data models, APIs

## Resources

- **Documentation**: `docs/RDF_DOCUMENTATION_SYSTEM.md`
- **Ontology**: `ontology/spec-kit-docs-extension.ttl`
- **Configuration**: `docs/ggen.toml`
- **Principles**: `memory/philosophy.ttl`

---

**This refactoring demonstrates the power of SDD applied to documentation itself. Documentation is no longer manually maintained - it is generated from semantic specifications, ensuring consistency, completeness, and alignment with the constitutional principles that guide Spec-Kit development.**
59 changes: 58 additions & 1 deletion README.md
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Expand Up @@ -28,6 +28,7 @@
- [🌟 Development Phases](#-development-phases)
- [🎯 Experimental Goals](#-experimental-goals)
- [🔧 Prerequisites](#-prerequisites)
- [🧪 Testing & Validation](#-testing--validation)
- [📖 Learn More](#-learn-more)
- [📋 Detailed Process](#-detailed-process)
- [🔍 Troubleshooting](#-troubleshooting)
Expand Down Expand Up @@ -320,10 +321,66 @@ Our research and experimentation focus on:
## 🔧 Prerequisites

- **Linux/macOS/Windows**
- [Supported](#-supported-ai-agents) AI coding agent.
- [Supported](#-supported-ai-agents) AI coding agent
- [uv](https://docs.astral.sh/uv/) for package management
- [Python 3.11+](https://www.python.org/downloads/)
- [Git](https://git-scm.com/downloads)
- **[ggen v6](https://github.com/seanchatmangpt/ggen)** - RDF-first code generation engine

### Installing ggen

ggen is required for RDF-first specification workflows. Install via cargo:

```bash
# Install from crates.io (when published)
cargo install ggen

# Or install from source
git clone https://github.com/seanchatmangpt/ggen.git
cd ggen
cargo install --path crates/ggen-cli

# Verify installation
ggen --version # Should show v6.x.x or higher
```

**What is ggen?** ggen v6 is an ontology-driven code generation engine that transforms RDF/Turtle specifications into markdown artifacts via deterministic transformations (`spec.md = μ(feature.ttl)`). It uses SHACL validation, SPARQL queries, and Tera templates configured in `ggen.toml` files.

## 🧪 Testing & Validation

Spec-Kit includes testcontainer-based integration tests that validate the ggen RDF-first workflow. These tests verify the constitutional equation `spec.md = μ(feature.ttl)` and ensure deterministic transformations.

### Running Validation Tests

```bash
# Install test dependencies
uv pip install -e ".[test]"

# Run all tests (requires Docker)
pytest tests/ -v

# Run integration tests only
pytest tests/integration/ -v -s

# View test documentation
cat tests/README.md
```

### What Gets Validated

- ✅ **ggen sync** generates markdown from TTL sources
- ✅ **Idempotence**: μ∘μ = μ (running twice produces identical output)
- ✅ **TTL syntax validation** rejects invalid RDF
- ✅ **Constitutional equation**: Deterministic transformation with hash verification
- ✅ **Five-stage pipeline**: μ₁→μ₂→μ₃→μ₄→μ₅

**Requirements**: Docker must be running. Tests use testcontainers to spin up a Rust environment, install ggen, and validate the complete workflow.

See [tests/README.md](./tests/README.md) for detailed documentation on the validation suite, including:
- Test architecture and fixtures
- CI/CD integration examples
- Troubleshooting guide
- Adding new tests

If you encounter issues with an agent, please open an issue so we can refine the integration.

Expand Down
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