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Merge pull request #2941 from fermga/copilot/fix-documentation-links
Fix 545 broken .md links and add dark/light theme toggle to documentation
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‎404.html‎

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<button class="md-header__button md-icon theme-toggle-button" title="Toggle dark/light mode" aria-label="Toggle theme" onclick="toggleTheme()">
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‎AGENTS/index.html‎

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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" id="theme-icon-light"><path d="M12 7a5 5 0 0 1 5 5 5 5 0 0 1-5 5 5 5 0 0 1-5-5 5 5 0 0 1 5-5m0 2a3 3 0 0 0-3 3 3 3 0 0 0 3 3 3 3 0 0 0 3-3 3 3 0 0 0-3-3m0-7 2.39 3.42C13.65 5.15 12.84 5 12 5s-1.65.15-2.39.42zM3.34 7l4.16-.35A7.2 7.2 0 0 0 5.94 8.5c-.44.74-.69 1.5-.83 2.29zm.02 10 1.76-3.77a7.13 7.13 0 0 0 2.38 4.14zm11.3 3.5-1.77-3.79a7.05 7.05 0 0 0 2.38-4.15l4.16-.35c-.14.79-.39 1.55-.83 2.29a7.2 7.2 0 0 1-1.56 1.85zm6.99-10-4.16.35A7.2 7.2 0 0 0 18.06 8.5c.44-.74.69-1.5.83-2.29l1.76 3.77z"/></svg>
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<h3 id="quick-links">Quick Links<a class="headerlink" href="#quick-links" title="Permanent link">&para;</a></h3>
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<li>Canonical Math Hub: <a href="https://github.com/fermga/TNFR-Python-Engine/tree/main/src/tnfr/mathematics/README">src/tnfr/mathematics/README.md</a></li>
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<li>Theory: <a href="TNFR.pdf">TNFR.pdf</a> · <a href="../UNIFIED_GRAMMAR_RULES/">UNIFIED_GRAMMAR_RULES.md</a></li>
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<li>Operators Grammar: <a href="src/tnfr/operators/grammar.py">src/tnfr/operators/grammar.py</a></li>
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<li><strong>Typical</strong>: Valid sequences maintain Δ Φ_s ≈ 0.6 (30% of threshold)</li>
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- Compute via <code>compute_phase_curvature(G)</code> [CANONICAL]
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<h4 id="coherence-length-_c-canonical-newly-promoted-nov-2025"><strong>Coherence Length (ξ_C)</strong> - CANONICAL ⭐ <strong>NEWLY PROMOTED (Nov 2025)</strong><a class="headerlink" href="#coherence-length-_c-canonical-newly-promoted-nov-2025" title="Permanent link">&para;</a></h4>
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‎API_CONTRACTS/index.html‎

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3722+
// Toggle icon visibility
3723+
const lightIcon = document.getElementById('theme-icon-light');
3724+
const darkIcon = document.getElementById('theme-icon-dark');
3725+
if (lightIcon && darkIcon) {
3726+
if (newScheme === 'slate') {
3727+
lightIcon.style.display = 'none';
3728+
darkIcon.style.display = 'block';
3729+
} else {
3730+
lightIcon.style.display = 'block';
3731+
darkIcon.style.display = 'none';
3732+
}
3733+
}
3734+
3735+
// Save preference
3736+
localStorage.setItem('theme-preference', newScheme);
3737+
}
3738+
3739+
// Initialize theme immediately
3740+
(function() {
3741+
const savedTheme = localStorage.getItem('theme-preference') || 'default';
3742+
const body = document.body;
3743+
body.setAttribute('data-md-color-scheme', savedTheme);
3744+
3745+
// Wait for DOM to set icon visibility
3746+
if (document.readyState === 'loading') {
3747+
document.addEventListener('DOMContentLoaded', function() {
3748+
updateThemeIcons(savedTheme);
3749+
});
3750+
} else {
3751+
updateThemeIcons(savedTheme);
3752+
}
3753+
3754+
function updateThemeIcons(theme) {
3755+
const lightIcon = document.getElementById('theme-icon-light');
3756+
const darkIcon = document.getElementById('theme-icon-dark');
3757+
if (lightIcon && darkIcon) {
3758+
if (theme === 'slate') {
3759+
lightIcon.style.display = 'none';
3760+
darkIcon.style.display = 'block';
3761+
} else {
3762+
lightIcon.style.display = 'block';
3763+
darkIcon.style.display = 'none';
3764+
}
3765+
}
3766+
}
3767+
})();
3768+
</script>
3769+
</body>
37083770
</html>

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