Notes

For diagnostics http://becs.aalto.fi/en/research/bayes/mcmcdiag/

http://xavier-fim.net/packages/ggmcmc/

http://blog.xavier-fim.net/2012/10/processing-stan-samples-with-ggmcmc-2/

% note how init is handled for multiple chains % https://groups.google.com/forum/?fromgroups#!searchin/stan-users/command$20line/stan-users/2YNalzIGgEs/NbbDsM9R9PMJ % bash script for stan % https://groups.google.com/forum/?fromgroups#!topic/stan-dev/awcXvXxIfHg