@@ -126,9 +126,9 @@ geom_coverage <- function(data, mapping = NULL, color = NULL, rect.color = NA,
126126 if (is.null(names(fill.color ))) {
127127 names(fill.color ) <- unique(data [, group.key ])
128128 }
129- sacle_fill_cols <- scale_fill_manual(values = fill.color )
129+ scale_fill_cols <- scale_fill_manual(values = fill.color )
130130 } else {
131- sacle_fill_cols <- NULL
131+ scale_fill_cols <- NULL
132132 }
133133 if (! single.nuc ) {
134134 mapping <- aes_string(xmin = " start" , xmax = " end" , ymin = " 0" , ymax = " score" , fill = group.key )
@@ -180,9 +180,9 @@ geom_coverage <- function(data, mapping = NULL, color = NULL, rect.color = NA,
180180 names(fill.color ) <- unique(data [, fill.str ])
181181 }
182182 }
183- sacle_fill_cols <- scale_fill_manual(values = fill.color )
183+ scale_fill_cols <- scale_fill_manual(values = fill.color )
184184 } else {
185- sacle_fill_cols <- NULL
185+ scale_fill_cols <- NULL
186186 }
187187 } else if (plot.type == " joint" ) {
188188 message(" For joint visualization, the mapping should contains start, score, color." )
@@ -255,8 +255,8 @@ geom_coverage <- function(data, mapping = NULL, color = NULL, rect.color = NA,
255255 plot.ele <- list (region.rect , region.facet )
256256
257257 # color the track
258- if (! is.null(sacle_fill_cols )) {
259- plot.ele <- append(plot.ele , sacle_fill_cols )
258+ if (! is.null(scale_fill_cols )) {
259+ plot.ele <- append(plot.ele , scale_fill_cols )
260260 }
261261
262262 if (range.position == " in" ) {
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