build: use uv for project management (#700)

* chore: update uv and pre-commit

* add lockfile

* fix docs

* fix workflow

* remove old tests

* remove host extra

* napari-src

* drop macos 13

* change min

* switch up

* try import mode

* update lockfile

* update fetch depth

* back to windows

* pin to wheels for windows pyqt5

* remove unsafe fixes from pyproject, add back to pre-commit

* remove lock

* repin qt

* update deploy too

Author: tlambert03

.github/workflows/deploy_docs.yml

@@ -15,17 +15,14 @@ jobs:
       - uses: actions/checkout@v4
         with:
           fetch-depth: 0
-      - uses: actions/setup-python@v5
+      - uses: astral-sh/setup-uv@v6
         with:
-          python-version: "3.x"
-      - run: |
-          python -m pip install --upgrade pip
-          python -m pip install -e .[docs]
+          enable-cache: true
 
       - name: Deploy docs to GitHub Pages
         if: github.event_name == 'push'
-        run: mkdocs gh-deploy --strict --force
+        run: uv run --group docs mkdocs gh-deploy --strict --force
 
       - name: Test that docs build without error
         if: github.event_name == 'pull_request'
-        run: mkdocs build --strict
+        run: uv run --group docs mkdocs build --strict

.github/workflows/test_and_deploy.yml

@@ -15,79 +15,93 @@ on:
 
 jobs:
   test:
-    name: Test
-    uses: pyapp-kit/workflows/.github/workflows/test-pyrepo.yml@v2
-    with:
-      os: ${{ matrix.os }}
-      python-version: ${{ matrix.python-version }}
-      qt: ${{ matrix.qt }}
-      pip-install-pre-release: ${{ github.event_name == 'schedule' }}
-      coverage-upload: artifact
+    name: ${{ matrix.os }} (${{ matrix.python-version }}) ${{ matrix.add-group || '' }} ${{ matrix.resolution || ''}}
+    runs-on: ${{ matrix.os }}
+    env:
+      UV_PRERELEASE: ${{ github.event_name == 'schedule' && 'allow' || 'if-necessary-or-explicit' }}
+      UV_NO_SYNC: 1
     strategy:
       fail-fast: false
       matrix:
         python-version: ["3.10", "3.11"]
         os: [ubuntu-latest, macos-latest, windows-latest]
-        qt: [pyqt6, pyside6]
+        add-group: [pyqt6, pyside6]
         include:
+          - os: windows-latest
+            python-version: "3.11"
+            resolution: "lowest-direct"
+            add-group: pyside6
           - python-version: "3.9"
             os: ubuntu-latest
-            qt: pyqt5
+            add-group: pyqt5
           - python-version: "3.9"
             os: ubuntu-latest
-            qt: pyside2
-          - python-version: "3.9"
-            os: macos-13
-            qt: pyside2
-          - python-version: "3.9"
-            os: macos-13
-            qt: pyqt5
-          - python-version: "3.9"
+            add-group: pyside2
+          - python-version: "3.11"
             os: windows-latest
-            qt: pyqt5
+            add-group: pyqt5
           - python-version: "3.10"
             os: ubuntu-latest
-            qt: pyside2
+            add-group: pyside2
           - python-version: "3.12"
             os: ubuntu-latest
-            qt: pyqt6
+            add-group: pyqt6
           - python-version: "3.12"
             os: ubuntu-latest
-            qt: pyside6
+            add-group: pyside6
           - python-version: "3.13"
             os: ubuntu-latest
-            qt: pyside6
+            add-group: pyside6
           - python-version: "3.13"
             os: windows-latest
-            qt: pyqt6
+            add-group: pyqt6
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+          fetch-tags: true
 
-  test-min-reqs:
-    name: Test min reqs
-    uses: pyapp-kit/workflows/.github/workflows/test-pyrepo.yml@v2
-    with:
-      os: ubuntu-latest
-      python-version: ${{ matrix.python-version }}
-      qt: pyqt5
-      pip-install-min-reqs: true
-      coverage-upload: artifact
-    strategy:
-      fail-fast: false
-      matrix:
-        python-version: ["3.9", "3.10", "3.11"]
+      - name: 🐍 Set up Python ${{ matrix.python-version }}
+        uses: astral-sh/setup-uv@v6
+        with:
+          python-version: ${{ matrix.python-version }}
+          enable-cache: true
+          cache-dependency-glob: "**/pyproject.toml"
 
-  test-pydantic1:
-    name: Test pydantic 1
-    uses: pyapp-kit/workflows/.github/workflows/test-pyrepo.yml@v2
-    with:
-      os: ubuntu-latest
-      python-version: 3.11
-      qt: pyqt6
-      pip-post-installs: '"pydantic<2"'
-      coverage-upload: artifact
+      - uses: pyvista/setup-headless-display-action@v4
+        with:
+          qt: true
+
+      - name: Install Dependencies
+        run: uv sync --no-dev --group test --group ${{ matrix.add-group || 'test' }} --resolution ${{ matrix.resolution || 'highest'}}
+
+      - name: 🧪 Run Tests
+        run: uv run coverage run -p -m pytest -v
+
+      # If something goes wrong with --pre tests, we can open an issue in the repo
+      - name: 📝 Report --pre Failures
+        if: failure() && github.event_name == 'schedule'
+        uses: JasonEtco/create-an-issue@v2
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+          PLATFORM: ${{ matrix.os }}
+          PYTHON: ${{ matrix.python-version }}
+          RUN_ID: ${{ github.run_id }}
+          TITLE: "[test-bot] pip install --pre is failing"
+        with:
+          filename: .github/TEST_FAIL_TEMPLATE.md
+          update_existing: true
+
+      - name: Upload coverage
+        uses: actions/upload-artifact@v4
+        with:
+          name: covreport-${{ matrix.os }}-py${{ matrix.python-version }}-${{ matrix.add-group }}-${{ matrix.resolution }}
+          path: ./.coverage*
+          include-hidden-files: true
 
   upload_coverage:
     if: always()
-    needs: [test, test-min-reqs, test-pydantic1]
+    needs: [test]
     uses: pyapp-kit/workflows/.github/workflows/upload-coverage.yml@v2
     secrets: inherit
 
@@ -97,7 +111,6 @@ jobs:
       dependency-repo: ${{ matrix.package }}
       dependency-ref: ${{ matrix.package-version }}
       dependency-extras: ${{ matrix.package-extras || 'testing' }}
-      host-extras: "testing"
       qt: pyqt5
       python-version: "3.10"
       post-install-cmd: "python -m pip install pytest-pretty lxml_html_clean" # just for napari
@@ -107,7 +120,7 @@ jobs:
       matrix:
         include:
           - package: napari/napari
-            pytest-args: napari/_tests/test_magicgui.py
+            pytest-args: src/napari/_tests/test_magicgui.py --import-mode=importlib
           - package: napari/napari
             package-version: "v0.4.19.post1"
             pytest-args: napari/_tests/test_magicgui.py
@@ -116,34 +129,33 @@ jobs:
             package-extras: test
             pytest-args: package/tests/test_PartSeg/test_napari_widgets.py
 
-  deploy:
+  build-and-inspect-package:
+    name: Build & inspect package.
     needs: test
     runs-on: ubuntu-latest
-    if: ${{ github.repository == 'pyapp-kit/magicgui' && contains(github.ref, 'tags') }}
-    permissions:
-      id-token: write
-      contents: write
     steps:
       - uses: actions/checkout@v4
         with:
           fetch-depth: 0
-      - name: Set up Python
-        uses: actions/setup-python@v5
-        with:
-          python-version: "3.x"
-      - name: Install dependencies
-        run: |
-          python -m pip install --upgrade pip
-          pip install -U setuptools setuptools_scm wheel twine build
-      - name: Build
-        run: |
-          git tag
-          python -m build
-          twine check dist/*
-      - name: Create Release
-        uses: softprops/action-gh-release@v2
+      - uses: hynek/build-and-inspect-python-package@v2
+
+  upload-to-pypi:
+    if: success() && startsWith(github.ref, 'refs/tags/') && github.event_name != 'schedule' && github.repository == 'pyapp-kit/magicgui'
+    name: Upload package to PyPI
+    needs: build-and-inspect-package
+    runs-on: ubuntu-latest
+    permissions:
+      id-token: write
+      contents: write
+    steps:
+      - name: Download built artifact to dist/
+        uses: actions/download-artifact@v4
         with:
-          files: dist/*
-          body_path: ${{ github.workspace }}/CHANGELOG.md
-      - name: Publish to PyPI
+          name: Packages
+          path: dist
+      - name: 🚢 Publish to PyPI
         uses: pypa/gh-action-pypi-publish@release/v1
+      - uses: softprops/action-gh-release@v2
+        with:
+          generate_release_notes: true
+          files: './dist/*'

.pre-commit-config.yaml

@@ -5,24 +5,24 @@ ci:
 
 repos:
   - repo: https://github.com/abravalheri/validate-pyproject
-    rev: v0.23
+    rev: v0.24.1
     hooks:
       - id: validate-pyproject
 
   - repo: https://github.com/crate-ci/typos
-    rev: v1.30.0
+    rev: v1.33.1
     hooks:
       - id: typos
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.9.9
+    rev: v0.11.12
     hooks:
-      - id: ruff
+      - id: ruff-check
         args: ["--fix", "--unsafe-fixes"]
       - id: ruff-format
 
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.15.0
+    rev: v1.16.0
     hooks:
       - id: mypy
         files: "^src/"