feat: update build.sh to use cmake, added pytest tests

Author: cpritcha

.gitignore

@@ -37,4 +37,150 @@ sc
 *.app
 
 # End of https://www.toptal.com/developers/gitignore/api/fortran
+### Python ###
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
 
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+parts/
+sdist/
+var/
+wheels/
+pip-wheel-metadata/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+pytestdebug.log
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+doc/_build/
+
+# PyBuilder
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+.python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#poetry.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+# .env
+.env/
+.venv/
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+pythonenv*
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# operating system-related files
+# file properties cache/storage on macOS
+*.DS_Store
+# thumbnail cache on Windows
+Thumbs.db
+
+# profiling data
+.prof

build.sh

@@ -4,16 +4,7 @@ set -o errexit
 set -o nounset
 set -o pipefail
 
-ENVIRONMENT=${1:-dev}
-
-if [[ "$ENVIRONMENT" == "dev" ]]; then
-  gfortran -Wall -Wextra -g -Wpedantic -std=f2003 -Wimplicit-interface src/*Component.f03 src/*CLI.f03 src/Main.f03 -o test/sc
-elif [[ "$ENVIRONMENT" == "cli" ]]; then
-  mkdir -p target/cli
-  gfortran -Wall -Wextra -Wpedantic -std=f2003 -Wimplicit-interface src/*Component.f03 src/*CLI.f03 src/Main.f03 -o target/cli/simplecrop
-elif [[ "$ENVIRONMENT" == "lib" ]]; then
-  mkdir -p target/lib
-  gfortran -Wall -Wextra -Wpedantic -std=f2003 -Wimplicit-interface src/*Component.f03 src/*CLI.f03 src/Main.f03 -c
-  ar crs libsimplecrop.a *.o
-  mv libsimplecrop.a target/lib
-fi
+mkdir -p src/_build
+cd src/_build
+cmake ../
+make all

src/.gitignore

@@ -0,0 +1 @@
+_build

test.py

@@ -0,0 +1,37 @@
+import os
+import pytest
+import shutil
+import subprocess
+
+
+@pytest.fixture(scope='session', autouse=True)
+def initialize(request):
+    if not os.path.exists('test/data'):
+        shutil.copytree('data', 'test/data')
+    root = os.path.dirname(os.path.realpath(__file__))
+    subprocess.run([os.path.join(root, 'src/_build/simplecrop')], check=True, cwd=os.path.join(root, 'test'))
+
+
+def read_soil_lines(fname):
+    with open(fname) as f:
+        content = f.read()
+        lines = content.splitlines()
+        return lines[7:]
+
+
+def read_plant_lines(fname):
+    with open(fname) as f:
+        content = f.read()
+        return content.splitlines()
+
+
+def test_soil_output():
+    soil_orig = read_soil_lines('output/soil.out')
+    soil_new = read_soil_lines('test/output/soil.out')
+    assert soil_orig == soil_new
+
+
+def test_plant_output():
+    plant_orig = read_plant_lines('output/plant.out')
+    plant_new = read_plant_lines('test/output/plant.out')
+    assert plant_orig == plant_new

test.sh

@@ -0,0 +1 @@
+data