Merge pull request #3490 from nipy/rel/1.8.3

REL: 1.8.3

Author: effigies

.mailmap

@@ -75,6 +75,7 @@ Franz Liem <franz.liem@gmail.com>
 Franz Liem <franz.liem@gmail.com> <franz.liem>
 Fred Loney <loneyf@ohsu.edu>
 Gael Varoquaux <gael.varoquaux@normalesup.org>
+Gal Ben-Zvi <hershkovitz1@mail.tau.ac.il>
 Gavin Cooper <Gavin.Cooper@newcastle.edu.au> <gjcooper@gmail.com>
 Ghislain Vaillant <ghislain.vaillant@icm-institute.org>
 Ghislain Vaillant <ghislain.vaillant@icm-institute.org> <ghisvail@users.noreply.github.com>

.zenodo.json

@@ -58,7 +58,7 @@
     },
     {
       "affiliation": "Klinikum rechts der Isar, TUM. ACPySS",
-      "name": "Manh\u00e3es-Savio, Alexandre",
+      "name": "Manhães-Savio, Alexandre",
       "orcid": "0000-0002-6608-6885"
     },
     {
@@ -127,7 +127,7 @@
     },
     {
       "affiliation": "Stanford University",
-      "name": "\u0106iri\u0107 , Rastko",
+      "name": "Ćirić , Rastko",
       "orcid": "0000-0001-6347-7939"
     },
     {
@@ -214,7 +214,7 @@
       "name": "Tungaraza, Rosalia"
     },
     {
-      "affiliation": "Charit\u00e8 Universit\u00e4tsmedizin Berlin, Germany",
+      "affiliation": "Charitè Universitätsmedizin Berlin, Germany",
       "name": "Dell'Orco, Andrea",
       "orcid": "0000-0002-3964-8360"
     },
@@ -277,7 +277,7 @@
     },
     {
       "affiliation": "ARAMIS LAB, Brain and Spine Institute (ICM), Paris, France.",
-      "name": "Guillon, Je\u0301re\u0301my",
+      "name": "Guillon, Jérémy",
       "orcid": "0000-0002-2672-7510"
     },
     {
@@ -314,7 +314,7 @@
       "orcid": "0000-0001-9130-1092"
     },
     {
-      "affiliation": "Division of Psychological and Social Medicine and Developmental Neuroscience, Faculty of Medicine, Technische Universit\u00e4t Dresden, Dresden, Germany",
+      "affiliation": "Division of Psychological and Social Medicine and Developmental Neuroscience, Faculty of Medicine, Technische Universität Dresden, Dresden, Germany",
       "name": "Bernardoni, Fabio",
       "orcid": "0000-0002-5112-405X"
     },
@@ -324,15 +324,15 @@
       "orcid": "0000-0002-0805-1350"
     },
     {
-      "affiliation": "Division of Psychological and Social Medicine and Developmental Neuroscience, Faculty of Medicine, Technische Universit\u00e4t Dresden, Dresden, Germany",
+      "affiliation": "Division of Psychological and Social Medicine and Developmental Neuroscience, Faculty of Medicine, Technische Universität Dresden, Dresden, Germany",
       "name": "Geisler, Daniel",
       "orcid": "0000-0003-2076-5329"
     },
     {
       "name": "Salvatore, John"
     },
     {
-      "affiliation": "CNRS LTCI, Telecom ParisTech, Universit\u00e9 Paris-Saclay",
+      "affiliation": "CNRS LTCI, Telecom ParisTech, Université Paris-Saclay",
       "name": "Gramfort, Alexandre",
       "orcid": "0000-0001-9791-4404"
     },
@@ -403,7 +403,7 @@
       "orcid": "0000-0003-4497-861X"
     },
     {
-      "name": "Heinsfeld, Anibal S\u00f3lon",
+      "name": "Heinsfeld, Anibal Sólon",
       "orcid": "0000-0002-2050-0614"
     },
     {
@@ -422,7 +422,7 @@
       "name": "Poldrack, Russell"
     },
     {
-      "affiliation": "1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montr\u00e9al, 3801 University Street, WB-208, H3A 2B4, Qu\u00e9bec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.",
+      "affiliation": "1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montréal, 3801 University Street, WB-208, H3A 2B4, Québec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.",
       "name": "Glatard, Tristan",
       "orcid": "0000-0003-2620-5883"
     },
@@ -441,7 +441,7 @@
     },
     {
       "affiliation": "University College London",
-      "name": "P\u00e9rez-Garc\u00eda, Fernando",
+      "name": "Pérez-García, Fernando",
       "orcid": "0000-0001-9090-3024"
     },
     {
@@ -456,6 +456,11 @@
       "affiliation": "University of Iowa",
       "name": "Welch, David"
     },
+    {
+      "affiliation": "Sagol School of Neuroscience, Tel Aviv University",
+      "name": "Ben-Zvi, Gal",
+      "orcid": "0000-0002-5655-9423"
+    },
     {
       "affiliation": "Max Planck Institute for Human Cognitive and Brain Sciences",
       "name": "Contier, Oliver",
@@ -481,7 +486,7 @@
     },
     {
       "affiliation": "Leibniz Institute for Neurobiology",
-      "name": "Stadler, J\u00f6rg",
+      "name": "Stadler, Jörg",
       "orcid": "0000-0003-4313-129X"
     },
     {
@@ -543,10 +548,6 @@
       "name": "Bielievtsov, Dmytro",
       "orcid": "0000-0003-3846-7696"
     },
-    {
-      "affiliation": "Sagol School of Neuroscience, Tel Aviv University",
-      "name": "Ben-Zvi, Gal"
-    },
     {
       "affiliation": "University of Newcastle, Australia",
       "name": "Cooper, Gavin",
@@ -562,7 +563,7 @@
     },
     {
       "affiliation": "German Institute for International Educational Research",
-      "name": "Linkersd\u00f6rfer, Janosch",
+      "name": "Linkersdörfer, Janosch",
       "orcid": "0000-0002-1577-1233"
     },
     {
@@ -576,7 +577,7 @@
       "name": "Stanley, Olivia"
     },
     {
-      "name": "K\u00fcttner, Ren\u00e9"
+      "name": "Küttner, René"
     },
     {
       "affiliation": "California Institute of Technology",
@@ -729,7 +730,7 @@
       "orcid": "0000-0003-2077-3070"
     },
     {
-      "affiliation": "TIB \u2013 Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany",
+      "affiliation": "TIB – Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany",
       "name": "Leinweber, Katrin",
       "orcid": "0000-0001-5135-5758"
     },
@@ -763,7 +764,7 @@
     },
     {
       "affiliation": "Universidad de Guadalajara",
-      "name": "Gonz\u00e1lez Orozco, Abel A."
+      "name": "González Orozco, Abel A."
     },
     {
       "affiliation": "ARAMIS Lab",

doc/changelog/1.X.X-changelog.rst

@@ -1,3 +1,21 @@
+1.8.3 (July 14, 2022)
+=====================
+
+Bug-fix release in the 1.8.x series.
+
+This release includes compatibility fixes for nibabel 4.x and resolves a denial-of-service
+bug when the etelemetry server is down that resulted in excessive (blocking) network hits that
+would cause any tools using nipype interfaces to take a very long time.
+
+(`Full changelog <https://github.com/nipy/nipype/milestone/1.8.3?closed=1>`__)
+
+  * FIX: Argument order to ``numpy.save()`` (https://github.com/nipy/nipype/pull/3485)
+  * FIX: Add tolerance parameter to ComputeDVARS (https://github.com/nipy/nipype/pull/3489)
+  * FIX: Delay access of nibabel.trackvis until actually needed (https://github.com/nipy/nipype/pull/3488)
+  * FIX: Avoid excessive etelemetry pings (https://github.com/nipy/nipype/pull/3484)
+  * ENH: Added outputs' generation to DWIBiascorrect interface (https://github.com/nipy/nipype/pull/3476)
+
+
 1.8.2 (June 06, 2022)
 =====================
 

tools/update_zenodo.py

@@ -69,4 +69,4 @@ def decommify(name):
 
     zenodo["creators"] = creators
 
-    zenodo_file.write_text("%s\n" % json.dumps(zenodo, indent=2))
+    zenodo_file.write_text("%s\n" % json.dumps(zenodo, indent=2, ensure_ascii=False))