@@ -381,13 +381,17 @@ def get_study_hash(seqinfo):
381381def fix_canceled_runs (seqinfo ):
382382 """Function that adds cancelme_ to known bad runs which were forgotten
383383 """
384- accession_number = get_unique (seqinfo , 'accession_number' )
385- if accession_number in fix_accession2run :
386- lgr .info ("Considering some runs possibly marked to be "
387- "canceled for accession %s" , accession_number )
388- badruns = fix_accession2run [accession_number ]
389- badruns_pattern = '|' .join (badruns )
390- for i , s in enumerate (seqinfo ):
384+ if not fix_accession2run :
385+ return seqinfo # nothing to do
386+ for i , s in enumerate (seqinfo ):
387+ accession_number = getattr (s , 'accession_number' )
388+ if accession_number and accession_number in fix_accession2run :
389+ lgr .info ("Considering some runs possibly marked to be "
390+ "canceled for accession %s" , accession_number )
391+ # This code is reminiscent of prior logic when operating on
392+ # a single accession, but left as is for now
393+ badruns = fix_accession2run [accession_number ]
394+ badruns_pattern = '|' .join (badruns )
391395 if re .match (badruns_pattern , s .series_id ):
392396 lgr .info ('Fixing bad run {0}' .format (s .series_id ))
393397 fixedkwargs = dict ()
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