ENH: add possibility to use own template/atlas to extract time activity curves #123
Description
What would you like to see added in this software?
Often PET users have their own favorite template/atlas that they want to use to extract time activity curves. Therefore, it would be ideal if the segmentation part of the workflow could be extended to include this functionality. It could be done by the use providing a template (.nii[.gz]) and corresponding atlas (_dseg.nii[.gz]/_dseg.tsv) file. Then the workflow should estimate the transform from template to the anatomical data, and then also apply this transform to the atlas data. Then it can be used for downstream analyses such as partial volume correction and also extraction of time activity curves.
Do you have any interest in helping implement the feature?
Yes
Additional information / screenshots
No response