Skip to content

Commit 57f27b0

Browse files
oestebanmgxd
andcommitted
fix: update node names since we are changing inner interfaces
Co-authored-by: Mathias Goncalves <mathiasg@stanford.edu>
1 parent 8285299 commit 57f27b0

File tree

1 file changed

+6
-6
lines changed

1 file changed

+6
-6
lines changed

niworkflows/func/util.py

Lines changed: 6 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -391,8 +391,8 @@ def init_enhance_and_skullstrip_bold_wf(
391391
skullstrip_first_pass = pe.Node(
392392
fsl.BET(frac=0.2, mask=True), name="skullstrip_first_pass"
393393
)
394-
bet_dilate = pe.Node(BinaryDilation(radius=6), name="skullstrip_first_dilate")
395-
bet_mask = pe.Node(ApplyMask(), name="skullstrip_first_mask")
394+
first_dilate = pe.Node(BinaryDilation(radius=6), name="first_dilate")
395+
first_mask = pe.Node(ApplyMask(), name="first_mask")
396396

397397
# Use AFNI's unifize for T2 constrast & fix header
398398
unifize = pe.Node(
@@ -505,10 +505,10 @@ def init_enhance_and_skullstrip_bold_wf(
505505
(inputnode, fixhdr_unifize, [("in_file", "hdr_file")]),
506506
(inputnode, fixhdr_skullstrip2, [("in_file", "hdr_file")]),
507507
(n4_correct, skullstrip_first_pass, [("output_image", "in_file")]),
508-
(skullstrip_first_pass, bet_dilate, [("mask_file", "in_file")]),
509-
(bet_dilate, bet_mask, [("out_file", "in_mask")]),
510-
(skullstrip_first_pass, bet_mask, [("out_file", "in_file")]),
511-
(bet_mask, unifize, [("out_file", "in_file")]),
508+
(skullstrip_first_pass, first_dilate, [("mask_file", "in_file")]),
509+
(first_dilate, first_mask, [("out_file", "in_mask")]),
510+
(skullstrip_first_pass, first_mask, [("out_file", "in_file")]),
511+
(first_mask, unifize, [("out_file", "in_file")]),
512512
(unifize, fixhdr_unifize, [("out_file", "in_file")]),
513513
(fixhdr_unifize, skullstrip_second_pass, [("out_file", "in_file")]),
514514
(skullstrip_first_pass, combine_masks, [("mask_file", "in_file")]),

0 commit comments

Comments
 (0)