r/ Disable LTO when running coverage.

Author: MLopez-Ibanez

.github/workflows/R.yml

@@ -162,7 +162,7 @@ jobs:
         env:
           NOT_CRAN: false
         run: |
-          coverage <- withr::with_makevars(c(MOOCORE_DEBUG="1"),
+          coverage <- withr::with_makevars(c(MOOCORE_DEBUG="1", LTO_OPT=""),
                         covr::package_coverage(type="all", quiet=FALSE, clean = FALSE,
                            commentDonttest = FALSE, commentDontrun = FALSE, flags="R",
                            install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package"))

c/Makefile

@@ -226,7 +226,7 @@ $(CXXSHLIB): $(LIBHV_OBJS)
 	$(CXX) $(CFLAGS) $(CPPFLAGS) $(LDFLAGS) -o $@ $^ $(SHLIB_LDFLAGS)
 
 clean:
-	@-$(RM) *.s *.i
+	@-$(RM) *.s *.i *.gcda mt19937/*.gcda
 	@-$(RM) config.status config.log
 	@-$(RM) Hypervolume_MEX.mex
 	@-$(RM) $(SHLIB) $(CXXSHLIB)

r/Makefile

@@ -112,7 +112,7 @@ winbuild winbuild_:
 	$(Reval) "devtools::check_win_devel()"
 
 covr:
-	$(Reval) "Sys.setenv(NOT_CRAN='true');covr::report(covr::package_coverage(type='all', quiet=FALSE), browse=TRUE)"
+	$(Reval) "Sys.setenv(NOT_CRAN='true');covr::report(withr::with_makevars(c(MOOCORE_DEBUG='1', LTO_OPT=''), covr::package_coverage(type='all', commentDonttest=FALSE, commentDontrun=FALSE, quiet=FALSE)), browse=TRUE)"
 
 benchmarks: quick-install
 	$(RM) ./vignettes/articles/bench/*.rds