Merge pull request #182 from msk-access/feature/fix_revert_sam

rhshah · web-flow · commit 2c196886c678 · 2022-09-14T16:26:15.000-04:00
Update qc_uncollapsed_bam_v2.0.cwl
diff --git a/qc_uncollapsed_bam/qc_uncollapsed_bam_v2.0.cwl b/qc_uncollapsed_bam/qc_uncollapsed_bam_v2.0.cwl
@@ -187,6 +187,8 @@ steps:
         default: unsorted
       - id: validation_stringency
         default: SILENT
+      - id: create_index
+        default: true
     out:
       - id: gatk_revert_sam_output
       - id: gatk_revert_sam_output_map
