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treeplot/treeplot.py

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@@ -8,21 +8,14 @@
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# --------------------------------------------------
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# %% Libraries
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# import os
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# import sys
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# import zipfile
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import numpy as np
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from sklearn.tree import export_graphviz
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# from sklearn.tree import export_text
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from subprocess import call
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import matplotlib.image as mpimg
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import matplotlib.pyplot as plt
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from graphviz import Source
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from setgraphviz import setgraphviz
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URL = 'https://erdogant.github.io/datasets/graphviz-2.38.zip'
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# %% Plot tree
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def plot(model, featnames=None, num_trees=None, plottype='horizontal', figsize=(25,25), verbose=3):
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"""Make tree plot for the input model.
@@ -302,59 +295,6 @@ def import_example(data='random', n_samples=1000, n_feat=10):
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return X, y
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# %% Get graphiz path and include into local PATH
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# def _set_graphviz_path(verbose=3):
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# finPath=''
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# if _get_platform()=="windows":
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# # Download from github
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# [gfile, curpath] = _download_graphviz(URL, verbose=verbose)
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# # curpath = os.path.join(os.path.dirname(os.path.abspath(__file__)), 'RESOURCES')
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# # filesindir = os.listdir(curpath)[0]
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# idx = gfile[::-1].find('.') + 1
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# dirname = gfile[:-idx]
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# getPath = os.path.abspath(os.path.join(curpath, dirname))
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# getZip = os.path.abspath(os.path.join(curpath, gfile))
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# # Unzip if path does not exists
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# if not os.path.isdir(getPath):
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# if verbose>=3: print('[treeplot] >Extracting graphviz files..')
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# [pathname, _] = os.path.split(getZip)
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# # Unzip
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# zip_ref = zipfile.ZipFile(getZip, 'r')
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# zip_ref.extractall(pathname)
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# zip_ref.close()
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# getPath = os.path.join(pathname, dirname)
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# # Point directly to the bin
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# finPath = os.path.abspath(os.path.join(getPath, 'release', 'bin'))
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# else:
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# pass
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# # sudo apt install python-pydot python-pydot-ng graphviz
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# # dpkg -l | grep graphviz
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# # call(['dpkg', '-l', 'grep', 'graphviz'])
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# # call(['dpkg', '-s', 'graphviz'])
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# # Add to system
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# if finPath not in os.environ["PATH"]:
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# if verbose>=3: print('[treeplot] >Set path in environment.')
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# os.environ["PATH"] += os.pathsep + finPath
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# return(finPath)
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# %%
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# def _get_platform():
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# platforms = {
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# 'linux1':'linux',
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# 'linux2':'linux',
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# 'darwin':'osx',
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# 'win32':'windows'
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# }
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# if sys.platform not in platforms:
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# return sys.platform
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# return platforms[sys.platform]
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# %% Check input model
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def _check_model(model, expected):
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modelname = str(model).lower()
@@ -369,36 +309,3 @@ def _check_model(model, expected):
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if (expected=='lgb'):
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if ('lgb' not in modelname):
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print('[treeplot] >Warning: The input model seems not to be a lightgbm model?')
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# %% Import example dataset from github.
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# def _download_graphviz(url, verbose=3):
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# """Import example dataset from github.
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# Parameters
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# ----------
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# url : str, optional
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# url-Link to graphviz. The default is 'https://erdogant.github.io/datasets/graphviz-2.38.zip'.
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# verbose : int, optional
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# Print message to screen. The default is 3.
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# Returns
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# -------
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# tuple : (gfile, curpath).
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# gfile : filename
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# curpath : currentpath
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# """
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# curpath = os.path.join(os.path.dirname(os.path.abspath(__file__)), 'RESOURCES')
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# gfile = wget.filename_from_url(url)
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# PATH_TO_DATA = os.path.join(curpath, gfile)
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# if not os.path.isdir(curpath):
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# if verbose>=3: print('[treeplot] >Downloading graphviz..')
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# os.makedirs(curpath, exist_ok=True)
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# # Check file exists.
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# if not os.path.isfile(PATH_TO_DATA):
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# # Download data from URL
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# if verbose>=3: print('[treeplot] >Downloading graphviz..')
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# wget.download(url, curpath)
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# return(gfile, curpath)

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