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update renv locally
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‎renv/profiles/lesson-requirements/renv.lock‎

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"LazyData": "true",
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"Roxygen": "list(markdown = TRUE)",
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"RoxygenNote": "7.3.2",
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"Author": "Karim Mané [aut, cre] (ORCID: <https://orcid.org/0000-0002-9892-2999>), Thibaut Jombart [ctb] (Thibault contributed in development of date_guess().), Abdoelnaser Degoot [aut] (ORCID: <https://orcid.org/0000-0001-8788-2496>), Bankolé Ahadzie [aut], Nuredin Mohammed [aut], Bubacarr Bah [aut] (ORCID: <https://orcid.org/0000-0003-3318-6668>), Hugo Gruson [ctb, rev] (ORCID: <https://orcid.org/0000-0002-4094-1476>), Pratik R. Gupte [rev] (ORCID: <https://orcid.org/0000-0001-5294-7819>), James M. Azam [rev] (ORCID: <https://orcid.org/0000-0001-5782-7330>), Joshua W. Lambert [rev] (ORCID: <https://orcid.org/0000-0001-5218-3046>), Chris Hartgerink [rev] (ORCID: <https://orcid.org/0000-0003-1050-6809>), Andree Valle-Campos [rev, ctb] (ORCID: <https://orcid.org/0000-0002-7779-481X>), London School of Hygiene and Tropical Medicine, LSHTM [cph] (ROR: <https://ror.org/00a0jsq62>), data.org [fnd]",
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"NeedsCompilation": "no",
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"Author": "Karim Mané [aut, cre] (<https://orcid.org/0000-0002-9892-2999>), Thibaut Jombart [ctb] (Thibault contributed in development of date_guess().), Abdoelnaser Degoot [aut] (<https://orcid.org/0000-0001-8788-2496>), Bankolé Ahadzie [aut], Nuredin Mohammed [aut], Bubacarr Bah [aut] (<https://orcid.org/0000-0003-3318-6668>), Hugo Gruson [ctb, rev] (<https://orcid.org/0000-0002-4094-1476>), Pratik R. Gupte [rev] (<https://orcid.org/0000-0001-5294-7819>), James M. Azam [rev] (<https://orcid.org/0000-0001-5782-7330>), Joshua W. Lambert [rev] (<https://orcid.org/0000-0001-5218-3046>), Chris Hartgerink [rev] (<https://orcid.org/0000-0003-1050-6809>), Andree Valle-Campos [rev, ctb] (<https://orcid.org/0000-0002-7779-481X>), London School of Hygiene and Tropical Medicine, LSHTM [cph] (00a0jsq62), data.org [fnd]",
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"Maintainer": "Karim Mané <karim.mane@lshtm.ac.uk>",
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"RemoteType": "github",
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"RemoteUsername": "epiverse-trace",
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"RemoteHost": "api.github.com",
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"RemoteRepo": "cleanepi",
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"RemoteUsername": "epiverse-trace",
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"RemotePkgRef": "epiverse-trace/cleanepi",
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"RemoteRef": "HEAD",
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"RemoteSha": "c6a72fb041553e049580302ad0a327798100271d",
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"RemoteHost": "api.github.com"
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"RemoteSha": "c6a72fb041553e049580302ad0a327798100271d"
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},
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"cli": {
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"Package": "cli",
@@ -2211,14 +2213,16 @@
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"Language": "en-GB",
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"Roxygen": "list(markdown = TRUE)",
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"RoxygenNote": "7.3.2",
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"Author": "Pratik Gupte [aut, cph] (ORCID: <https://orcid.org/0000-0001-5294-7819>), Rosalind Eggo [aut, cph, cre] (ORCID: <https://orcid.org/0000-0002-0362-6717>), Edwin Van Leeuwen [aut, cph] (ORCID: <https://orcid.org/0000-0002-2383-5305>), Adam Kucharski [ctb, rev] (ORCID: <https://orcid.org/0000-0001-8814-9421>), Tim Taylor [ctb, rev] (ORCID: <https://orcid.org/0000-0002-8587-7113>), Banky Ahadzie [ctb], Alexis Robert [ctb] (ORCID: <https://orcid.org/0000-0002-4516-2965>), Hugo Gruson [rev] (ORCID: <https://orcid.org/0000-0002-4094-1476>), Joshua W. Lambert [rev] (ORCID: <https://orcid.org/0000-0001-5218-3046>), James M. Azam [rev] (ORCID: <https://orcid.org/0000-0001-5782-7330>), Alexis Robert [rev] (ORCID: <https://orcid.org/0000-0002-4516-2965>)",
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"NeedsCompilation": "yes",
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"Author": "Pratik Gupte [aut, cph] (<https://orcid.org/0000-0001-5294-7819>), Rosalind Eggo [aut, cph, cre] (<https://orcid.org/0000-0002-0362-6717>), Edwin Van Leeuwen [aut, cph] (<https://orcid.org/0000-0002-2383-5305>), Adam Kucharski [ctb, rev] (<https://orcid.org/0000-0001-8814-9421>), Tim Taylor [ctb, rev] (<https://orcid.org/0000-0002-8587-7113>), Banky Ahadzie [ctb], Alexis Robert [ctb] (<https://orcid.org/0000-0002-4516-2965>), Hugo Gruson [rev] (<https://orcid.org/0000-0002-4094-1476>), Joshua W. Lambert [rev] (<https://orcid.org/0000-0001-5218-3046>), James M. Azam [rev] (<https://orcid.org/0000-0001-5782-7330>), Alexis Robert [rev] (<https://orcid.org/0000-0002-4516-2965>)",
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"Maintainer": "Rosalind Eggo <rosalind.eggo@lshtm.ac.uk>",
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"RemoteType": "github",
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"RemoteUsername": "epiverse-trace",
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"RemoteHost": "api.github.com",
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"RemoteRepo": "epidemics",
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"RemoteUsername": "epiverse-trace",
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"RemotePkgRef": "epiverse-trace/epidemics",
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"RemoteRef": "HEAD",
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"RemoteSha": "f064fc478bf96b75e7891b0583695d98a18a7a0f",
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"RemoteSha": "f064fc478bf96b75e7891b0583695d98a18a7a0f"
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},
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"epiparameter": {
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"Package": "epiparameter",
@@ -2418,7 +2422,7 @@
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},
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"fitdistrplus": {
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"Package": "fitdistrplus",
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"Version": "1.2-2",
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"Version": "1.2-3",
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"Source": "Repository",
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"Title": "Help to Fit of a Parametric Distribution to Non-Censored or Censored Data",
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"Authors@R": "c(person(\"Marie-Laure\", \"Delignette-Muller\", role = \"aut\", email = \"marielaure.delignettemuller@vetagro-sup.fr\", comment = c(ORCID = \"0000-0001-5453-3994\")), person(\"Christophe\", \"Dutang\", role = \"aut\", email = \"christophe.dutang@ensimag.fr\", comment = c(ORCID = \"0000-0001-6732-1501\")), person(\"Regis\", \"Pouillot\", role = \"ctb\"), person(\"Jean-Baptiste\", \"Denis\", role = \"ctb\"), person(\"Aurélie\", \"Siberchicot\", role = c(\"aut\", \"cre\"), email = \"aurelie.siberchicot@univ-lyon1.fr\", comment = c(ORCID = \"0000-0002-7638-8318\")))",
@@ -2454,7 +2458,7 @@
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"BugReports": "https://github.com/lbbe-software/fitdistrplus/issues",
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"Contact": "Marie-Laure Delignette-Muller <marielaure.delignettemuller@vetagro-sup.fr> or Christophe Dutang <christophe.dutang@ensimag.fr>",
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"NeedsCompilation": "no",
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"Author": "Marie-Laure Delignette-Muller [aut] (<https://orcid.org/0000-0001-5453-3994>), Christophe Dutang [aut] (<https://orcid.org/0000-0001-6732-1501>), Regis Pouillot [ctb], Jean-Baptiste Denis [ctb], Aurélie Siberchicot [aut, cre] (<https://orcid.org/0000-0002-7638-8318>)",
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"Author": "Marie-Laure Delignette-Muller [aut] (ORCID: <https://orcid.org/0000-0001-5453-3994>), Christophe Dutang [aut] (ORCID: <https://orcid.org/0000-0001-6732-1501>), Regis Pouillot [ctb], Jean-Baptiste Denis [ctb], Aurélie Siberchicot [aut, cre] (ORCID: <https://orcid.org/0000-0002-7638-8318>)",
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"Maintainer": "Aurélie Siberchicot <aurelie.siberchicot@univ-lyon1.fr>",
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"Repository": "CRAN"
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},
@@ -5936,16 +5940,16 @@
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},
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"simulist": {
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"Package": "simulist",
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"Version": "0.5.0.9000",
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"Source": "GitHub",
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"Version": "0.5.0",
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"Source": "Repository",
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"Title": "Simulate Disease Outbreak Line List and Contacts Data",
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"Authors@R": "c( person(\"Joshua W.\", \"Lambert\", , \"joshua.lambert@lshtm.ac.uk\", role = c(\"aut\", \"cre\", \"cph\"), comment = c(ORCID = \"0000-0001-5218-3046\")), person(\"Carmen\", \"Tamayo\", , \"carmen.tamayo-cuartero@lshtm.ac.uk\", role = \"aut\", comment = c(ORCID = \"0000-0003-4184-2864\")), person(\"Hugo\", \"Gruson\", , \"hugo@data.org\", role = c(\"ctb\", \"rev\"), comment = c(ORCID = \"0000-0002-4094-1476\")), person(\"Pratik R.\", \"Gupte\", , \"pratik.gupte@lshtm.ac.uk\", role = c(\"ctb\", \"rev\"), comment = c(ORCID = \"0000-0001-5294-7819\")), person(\"Adam\", \"Kucharski\", , \"adam.kucharski@lshtm.ac.uk\", role = \"rev\", comment = c(ORCID = \"0000-0001-8814-9421\")), person(\"Chris\", \"Hartgerink\", , \"chris@data.org\", role = \"rev\", comment = c(ORCID = \"0000-0003-1050-6809\")), person(\"Sebastian\", \"Funk\", , \"sebastian.funk@lshtm.ac.uk\", role = \"ctb\", comment = c(ORCID = \"0000-0002-2842-3406\")), person(\"London School of Hygiene and Tropical Medicine, LSHTM\", role = \"cph\", comment = c(ROR = \"00a0jsq62\")) )",
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"Description": "Tools to simulate realistic raw case data for an epidemic in the form of line lists and contacts using a branching process. Simulated outbreaks are parameterised with epidemiological parameters and can have age-structured populations, age-stratified hospitalisation and death risk and time-varying case fatality risk.",
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"License": "MIT + file LICENSE",
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"URL": "https://github.com/epiverse-trace/simulist, https://epiverse-trace.github.io/simulist/",
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"BugReports": "https://github.com/epiverse-trace/simulist/issues",
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"Depends": [
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"R (>= 4.2.0)"
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"R (>= 4.1.0)"
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],
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"Imports": [
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"checkmate",
@@ -5959,7 +5963,7 @@
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"dplyr",
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"epicontacts (>= 1.1.3)",
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"ggplot2",
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"incidence2 (>= 2.6.2)",
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"incidence2 (>= 2.3.0)",
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"knitr",
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"rmarkdown",
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"spelling",
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"Config/testthat/edition": "3",
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"Encoding": "UTF-8",
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"Language": "en-GB",
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"Roxygen": "list(markdown = TRUE)",
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"RoxygenNote": "7.3.2",
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"Author": "Joshua W. Lambert [aut, cre, cph] (ORCID: <https://orcid.org/0000-0001-5218-3046>), Carmen Tamayo [aut] (ORCID: <https://orcid.org/0000-0003-4184-2864>), Hugo Gruson [ctb, rev] (ORCID: <https://orcid.org/0000-0002-4094-1476>), Pratik R. Gupte [ctb, rev] (ORCID: <https://orcid.org/0000-0001-5294-7819>), Adam Kucharski [rev] (ORCID: <https://orcid.org/0000-0001-8814-9421>), Chris Hartgerink [rev] (ORCID: <https://orcid.org/0000-0003-1050-6809>), Sebastian Funk [ctb] (ORCID: <https://orcid.org/0000-0002-2842-3406>), London School of Hygiene and Tropical Medicine, LSHTM [cph] (ROR: <https://ror.org/00a0jsq62>)",
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"NeedsCompilation": "no",
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"Author": "Joshua W. Lambert [aut, cre, cph] (<https://orcid.org/0000-0001-5218-3046>), Carmen Tamayo [aut] (<https://orcid.org/0000-0003-4184-2864>), Hugo Gruson [ctb, rev] (<https://orcid.org/0000-0002-4094-1476>), Pratik R. Gupte [ctb, rev] (<https://orcid.org/0000-0001-5294-7819>), Adam Kucharski [rev] (<https://orcid.org/0000-0001-8814-9421>), Chris Hartgerink [rev] (<https://orcid.org/0000-0003-1050-6809>), Sebastian Funk [ctb] (<https://orcid.org/0000-0002-2842-3406>), London School of Hygiene and Tropical Medicine, LSHTM [cph] (00a0jsq62)",
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"Maintainer": "Joshua W. Lambert <joshua.lambert@lshtm.ac.uk>",
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"RemoteType": "github",
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"RemoteHost": "api.github.com",
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"RemoteRepo": "simulist",
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"RemoteUsername": "epiverse-trace",
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"RemotePkgRef": "epiverse-trace/simulist",
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"RemoteRef": "HEAD",
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"RemoteSha": "5a050da443304884871225f7fdf821d34695eeed"
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"Repository": "CRAN"
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},
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"skimr": {
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"Package": "skimr",

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