From d17379eb592cc24c17e506d7a3a45d67b60a1b0e Mon Sep 17 00:00:00 2001 From: Kristen Hunter Date: Tue, 19 Sep 2023 09:44:35 +1000 Subject: [PATCH] add power calculation packages for multilevel experiments: PowerUpR and PUMP --- ExperimentalDesign.md | 8 +++++++- 1 file changed, 7 insertions(+), 1 deletion(-) diff --git a/ExperimentalDesign.md b/ExperimentalDesign.md index 0b2ef52..00cf646 100644 --- a/ExperimentalDesign.md +++ b/ExperimentalDesign.md @@ -207,7 +207,13 @@ visualization of factorial experiments based on package "ggplot2". `r pkg("ssizeRNA")` with sample size for RNA sequencing experiments, and package `r pkg("ssize.fdr")` for sample sizes in microarray experiments (requesting a certain power while - limiting the false discovery rate). + limiting the false discovery rate). Package `r pkg("PowerUpR")` + calculates power, effect size, and sample size for + multilevel experiments. Package `r pkg("PUMP")` estimates + these quantities for multilevel experiments with multiple outcomes, + and also allows for easy exploration of sensitivity to + different choices of parameter values. + ### Experimental designs for industrial experiments