chore(deps): Bump the noodles group with 4 updates

Bumps the noodles group with 4 updates: [noodles-bgzf](https://github.com/zaeleus/noodles), [noodles-bam](https://github.com/zaeleus/noodles), [noodles-bed](https://github.com/zaeleus/noodles) and [noodles-fastq](https://github.com/zaeleus/noodles).


Updates `noodles-bgzf` from 0.36.0 to 0.42.0
- [Commits](zaeleus/noodles@noodles-bgzf-0.36.0...noodles-bgzf-0.42.0)

Updates `noodles-bam` from 0.81.0 to 0.83.0
- [Commits](zaeleus/noodles@noodles-bam-0.81.0...noodles-bam-0.83.0)

Updates `noodles-bed` from 0.26.0 to 0.28.0
- [Commits](zaeleus/noodles@noodles-bed-0.26.0...noodles-bed-0.28.0)

Updates `noodles-fastq` from 0.19.0 to 0.21.0
- [Commits](zaeleus/noodles@noodles-fastq-0.19.0...noodles-fastq-0.21.0)

---
updated-dependencies:
- dependency-name: noodles-bgzf
  dependency-version: 0.42.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
- dependency-name: noodles-bam
  dependency-version: 0.83.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
- dependency-name: noodles-bed
  dependency-version: 0.28.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
- dependency-name: noodles-fastq
  dependency-version: 0.21.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
...

Signed-off-by: dependabot[bot] <support@github.com>

Author: dependabot[bot]

Cargo.lock

@@ -22,7 +22,7 @@ async-trait = "0.1.85"
 opendal = { version = "0.53.3", features = ["services-gcs", "services-s3","layers-blocking", "services-azblob", "services-http"] }
 noodles = { version = "0.93.0",  features = ["bam", "vcf", "bgzf", "cram", "async"]}
 
-noodles-bgzf = { version = "0.36.0",features = ["libdeflate"] }
+noodles-bgzf = { version = "0.42.0",features = ["libdeflate"] }
 noodles-cram  = { git = "https://github.com/biodatageeks/noodles.git",rev = "d6f205e9bb5369762236724fb54d24c5e1d9b79a", features = ["async"] }
 noodles-sam = { git = "https://github.com/biodatageeks/noodles.git",rev = "d6f205e9bb5369762236724fb54d24c5e1d9b79a" }
 noodles-fasta = { git = "https://github.com/biodatageeks/noodles.git",rev = "d6f205e9bb5369762236724fb54d24c5e1d9b79a", features = ["async"] }

Cargo.toml

@@ -19,7 +19,7 @@ bytes.workspace = true
 datafusion-bio-format-core = {path = "../bio-format-core"}
 futures.workspace = true
 futures-util.workspace = true
-noodles-bam = {version = "0.81.0" , features = ["async"]}
+noodles-bam = {version = "0.83.0" , features = ["async"]}
 noodles-sam = "0.77.0"
 async-stream = "0.3.6"
 log = "0.4.27"

datafusion/bio-format-bam/Cargo.toml

@@ -25,7 +25,7 @@ futures = "0.3.31"
 log = "0.4.27"
 async-stream = "0.3.6"
 env_logger = "0.11.8"
-noodles-bed = "0.26.0"
+noodles-bed = "0.28.0"
 futures-util = "0.3.31"
 
 [[example]]

datafusion/bio-format-bed/Cargo.toml

@@ -18,7 +18,7 @@ tokio-util.workspace = true
 tokio.workspace = true
 bytes.workspace = true
 datafusion-bio-format-core = {path = "../bio-format-core"}
-noodles-fastq = {version = "0.19.0", features = ["async"]}
+noodles-fastq = {version = "0.21.0", features = ["async"]}
 futures.workspace = true
 futures-util.workspace = true
 async-compression.workspace = true