Merge branch 'develop' into fco/expose_more_args

Author: amrit110

.github/workflows/docker.yml

@@ -32,19 +32,19 @@ jobs:
           echo "version=$VERSION" >> $GITHUB_OUTPUT
 
       - name: Log in to Docker Hub
-        uses: docker/login-action@9780b0c442fbb1117ed29e0efdff1e18412f7567
+        uses: docker/login-action@74a5d142397b4f367a81961eba4e8cd7edddf772
         with:
           username: ${{ secrets.DOCKER_USERNAME }}
           password: ${{ secrets.DOCKER_PASSWORD }}
 
       - name: Extract metadata (tags, labels) for Docker
         id: meta
-        uses: docker/metadata-action@8e1d5461f02b7886d3c1a774bfbd873650445aa2
+        uses: docker/metadata-action@902fa8ec7d6ecbf8d84d538b9b233a880e428804
         with:
           images: vectorinstitute/vector-inference
 
       - name: Build and push Docker image
-        uses: docker/build-push-action@ca877d9245402d1537745e0e356eab47c3520991
+        uses: docker/build-push-action@471d1dc4e07e5cdedd4c2171150001c434f0b7a4
         with:
           context: .
           file: ./Dockerfile

.github/workflows/publish.yml

@@ -12,16 +12,21 @@ jobs:
         run: |
           sudo apt-get update
           sudo apt-get install libcurl4-openssl-dev libssl-dev
+
       - uses: actions/checkout@v4.2.2
-      - name: Install poetry
-        run: python3 -m pip install --upgrade pip && python3 -m pip install poetry
+
+      - name: Install uv
+        uses: astral-sh/setup-uv@v5
+        with:
+          version: "0.6.6"
+          enable-cache: true
+
       - uses: actions/setup-python@v5.4.0
         with:
           python-version: '3.10'
+
       - name: Build package
-        run: poetry build
+        run: uv build
+
       - name: Publish package
-        uses: pypa/gh-action-pypi-publish@76f52bc884231f62b9a034ebfe128415bbaabdfc
-        with:
-          user: __token__
-          password: ${{ secrets.PYPI_API_TOKEN }}
+        run: uv publish --token ${{ secrets.PYPI_API_TOKEN }}

.github/workflows/unit_tests.yml

@@ -39,6 +39,9 @@ on:
 jobs:
   unit-tests:
     runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: ["3.10", "3.11", "3.12"]
     steps:
       - uses: actions/checkout@v4.2.2
 
@@ -49,10 +52,10 @@ jobs:
           version: "0.5.21"
           enable-cache: true
 
-      - name: "Set up Python"
+      - name: "Set up Python ${{ matrix.python-version }}"
         uses: actions/setup-python@v5.4.0
         with:
-          python-version-file: ".python-version"
+          python-version: ${{ matrix.python-version }}
 
       - name: Install the project
         run: uv sync --dev

.pre-commit-config.yaml

@@ -16,7 +16,7 @@ repos:
     - id: check-toml
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: 'v0.9.10'
+    rev: 'v0.11.0'
     hooks:
     - id: ruff
       args: [--fix, --exit-non-zero-on-fix]

README.md

@@ -2,6 +2,7 @@
 
 ----------------------------------------------------
 
+[![PyPI](https://img.shields.io/pypi/v/vec-inf)](https://pypi.org/project/vec-inf)
 [![code checks](https://github.com/VectorInstitute/vector-inference/actions/workflows/code_checks.yml/badge.svg)](https://github.com/VectorInstitute/vector-inference/actions/workflows/code_checks.yml)
 [![docs](https://github.com/VectorInstitute/vector-inference/actions/workflows/docs_deploy.yml/badge.svg)](https://github.com/VectorInstitute/vector-inference/actions/workflows/docs_deploy.yml)
 [![codecov](https://codecov.io/github/VectorInstitute/vector-inference/branch/develop/graph/badge.svg?token=NI88QSIGAC)](https://app.codecov.io/github/VectorInstitute/vector-inference/tree/develop)