add cellpose plugin to index

Author: yxdragon

imagepy/menus/Plugins/Contribute/Contributions/CellPose.md

@@ -0,0 +1,70 @@
+# cellpose-plgs
+
+**Path:** https://github.com/Image-Py/cellpose-plgs
+
+**Version:** 0.1
+
+**Author:** YXDragon, Carsen-Stringer
+
+**Email:** yxdragon@imagepy.org
+
+**Keyword:** cellpose, segment, unet
+
+**Description:** cellpose is a generalist algorithm for cell and nucleus segmentation, this is a cellpose plugin for imagepy.
+
+
+
+## Document
+### Install
+
+there are two method to install  cellpose-plgs, Install Plugins or use Plugins Manager
+
+1. **Menus: Plugins > Install > Install Plugins** then input https://github.com/Image-Py/cellpose-plgs
+
+   ![](http://skimgplgs.imagepy.org/cellpose/install.png)
+
+   
+
+2. **Menus:  Plugins > Manager > Plugins Manager**, befor you open the manager, you should update the software, (to getting the newest plugins catlog). for git version, please pull, for release version, please use *Menus: Plugins > Updata Software*.
+
+   ![](http://skimgplgs.imagepy.org/cellpose/manager.png)
+
+when the cellpose-plgs is installed seccessfully, The cellpose would appears below the **Plugins** menus.
+
+
+
+### Usage
+
+**Menus: File > Open** to Open a Image, you can also use **Menus: File > Import > Import Sequence** to open a sequence. Then **Menus: Plugins > Cell Pose > Cell Pose Eval**, you would got a parameter dialog, Setting the parameter, then OK.
+
+
+
+**Parameters:**
+
+**model:** select model
+
+**cytoplasm:** select the cytomplasm channel. 0: gray, 1:red, 2:green, 3:blue
+
+**nucleus:** select the nucleus channel,  if there is no, select 0.
+
+**show color flow:** the color flow result would be shown when checked.
+
+**show diams tabel:** the diams result would be shown when checked.
+
+**slice:** process the current image or all images when it is a sequence.
+
+![](http://skimgplgs.imagepy.org/cellpose/cellpose.png)
+
+
+
+### Analysis
+
+**Menus: Analysis > Region Analysis > Geometry Analysis** do a region analysis. And we can do many other things in ImagePy, such as set a colormap, or overlay the mask on the original image.
+
+![](http://skimgplgs.imagepy.org/cellpose/region.png)
+
+
+
+### Reference
+
+Thanks for CellPose and the supporting from  Carsen Stringer and Marius Pachitariu. More detail about CellPose please read the [paper](https://t.co/4HFsxDezAP?amp=1) or watch the [talk](https://t.co/JChCsTD0SK?amp=1). 

imagepy/menus/Plugins/Contribute/pmanager_wgt.py

@@ -4,7 +4,7 @@
 
 @author: yxl
 """
-import wx, os, glob, shutil
+import wx, os, glob, shutil, random
 from imagepy import IPy, root_dir
 from imagepy.core.manager import PluginsManager
 from imagepy.ui.mkdownwindow import HtmlPanel, md2html
@@ -110,7 +110,7 @@ def load(self):
         keys = set([i['path'] for i in prjs])
         for i in has:
             if not i['path'] in keys: prjs.append(i)
-        prjs = sorted([(i['name'], i) for i in prjs])
+        prjs = sorted([(i['name']+str(random.random()), i) for i in prjs])
         self.prjs = [i[1] for i in prjs]
 
         for i in self.prjs: