nothing

Author: yxdragon

imagepy/menus/Analysis/Region Analysis/regionprops_plgs.py

@@ -64,7 +64,7 @@ def run(self, ips, imgs, para = None):
             if para['cov']:
                 ellips = [i.centroid[::-1] + (i.major_axis_length/2,i.minor_axis_length/2, i.orientation+np.pi/2) for i in ls]
                 layer['body'].append({'type':'ellipses', 'body':ellips})
-            print(i,i,i,i,i)
+
             if len(ls)>0: mark['body'][i] = layer
 
             if para['center']:

sciapp/action/__init__.py

@@ -4,4 +4,5 @@
 from .plugin.mea_tools import *
 from .plugin.shp_tools import *
 from .plugin.roi_tools import *
+from .plugin.img_tools import *
 from .advanced import Filter, Free, Simple, Table, Macros, Widget, dataio, Report

sciapp/action/advanced/simple.py

@@ -42,7 +42,7 @@ def check(self, ips):
             elif ips.dtype==np.int32 and not 'int' in note:
                 self.app.alert('Do not surport 32-bit int uint image')
                 return False
-            elif ips.dtype in {np.float32, np.float64} and not 'float' in note:
+            elif (ips.dtype==np.float32 or ips.dtype==np.float64) and not 'float' in note:
                 self.app.alert('Do not surport float image')
                 return False
         if sum([i in note for i in ('stack','stack2d','stack3d')])>0:

sciapp/action/plugin/generalio.py

@@ -1,7 +1,7 @@
 from ..advanced import dataio
 from skimage.io import imread, imsave
 
-for i in ('bmp', 'jpg', 'tif', 'png', 'gif'):
+for i in ('bmp', 'jpg', 'jpeg', 'tif', 'png', 'gif'):
 	dataio.ReaderManager.add(i, imread, 'img')
 	dataio.WriterManager.add(i, imsave, 'img')
 
@@ -17,4 +17,29 @@ class SaveImage(dataio.ImageWriter):
 
 	def load(self, ips):
 		self.filt = [i for i in sorted(dataio.WriterManager.names())]
-		return True
+		return True
+
+from pandas import read_csv, read_excel
+read_csv2 = lambda p:read_csv(p, index_col=0)
+read_excel2 = lambda p:read_excel(p, index_col=0)
+
+save_csv = lambda path, data:data.to_csv(path)
+dataio.ReaderManager.add('csv', read_csv2, 'tab')
+dataio.WriterManager.add('csv', save_csv, 'tab')
+
+
+save_excel = lambda path, data:data.to_excel(path)
+dataio.ReaderManager.add('xls', read_excel2, 'tab')
+dataio.WriterManager.add('xls', save_excel, 'tab')
+dataio.ReaderManager.add('xlsx', read_excel2, 'tab')
+dataio.WriterManager.add('xlsx', save_excel, 'tab')
+
+class OpenTable(dataio.Reader):
+    title = 'Excel Open'
+    tag = 'tab'
+    filt = ['csv', 'xls','xlsx']
+
+class SaveTable(dataio.TableWriter):
+    title = 'Excel Save'
+    tag = 'tab'
+    filt = ['csv', 'xls', 'xlsx']

sciapp/action/plugin/img_tools.py

@@ -0,0 +1,55 @@
+from sciapp.action import ImageTool
+
+class MoveTool(ImageTool):
+    title = 'Move And Scale'
+    def __init__(self): 
+        self.oldxy = None
+        
+    def mouse_down(self, obj, x, y, btn, **key):
+        if btn==1: self.oldxy = key['px'], key['py']
+        if btn==3: key['canvas'].fit()
+        
+    def mouse_up(self, obj, x, y, btn, **key):
+        self.oldxy = None
+    
+    def mouse_move(self, obj, x, y, btn, **key):
+        if self.oldxy is None: return
+        ox, oy = self.oldxy
+        up = (1,-1)[key['canvas'].up]
+        key['canvas'].move(key['px']-ox, (key['py']-oy)*up)
+        self.oldxy = key['px'], key['py']
+    
+    def mouse_wheel(self, obj, x, y, d, **key):
+        if d>0: key['canvas'].zoomout(x, y, coord='data')
+        if d<0: key['canvas'].zoomin(x, y, coord='data')
+
+class ScaleTool(ImageTool):
+    title = 'Scope'
+    def __init__(self):
+        self.ox, self.oy = 0, 0
+            
+    def mouse_down(self, ips, x, y, btn, **key):
+        if btn==2:
+            self.ox, self.oy = key['canvas'].to_panel_coor(x,y)
+            print(self.ox, self.oy)
+        #print 'down', self.ox, self.oy
+        if btn==1: key['canvas'].zoomout(x, y, 'data')
+        if btn==3: key['canvas'].zoomin(x, y, 'data')
+        ips.update()
+    
+    def mouse_up(self, ips, x, y, btn, **key):
+        pass
+    
+    def mouse_move(self, ips, x, y, btn, **key):
+        if btn==2:
+            x,y = key['canvas'].to_panel_coor(x,y)
+            #print 'x,y',x,y
+            #print 'dx,dy:', x-self.ox, y-self.oy
+            key['canvas'].move(x-self.ox, y-self.oy)
+            ips.update()
+        self.ox, self.oy = x,y
+        
+    def mouse_wheel(self, ips, x, y, d, **key):
+        if d>0:key['canvas'].zoomout(x, y, 'data')
+        if d<0:key['canvas'].zoomin(x, y, 'data')
+        ips.update()