Notebooks: add horizontal translation to activity plots

Author: Daniel Incicau

notebooks/layer5_CC_CS_connection.ipynb

@@ -883,8 +883,11 @@
     "fig, axs = plt.subplots(1, 2, figsize=(18, 6))\n",
     "xticks = np.linspace(0, len(cc_cs_weights)-1, len(cc_cs_weights))\n",
     "\n",
-    "trans1 = Affine2D().translate(-0.05, 0.0)\n",
-    "trans2 = Affine2D().translate(+0.0, 0.0)\n",
+    "trans1 = Affine2D().translate(-0.2, 0.0)\n",
+    "trans2 = Affine2D().translate(-0.1, 0.0)\n",
+    "trans3 = Affine2D().translate(+0.0, 0.0)\n",
+    "trans4 = Affine2D().translate(+0.1, 0.0)\n",
+    "\n",
     "\n",
     "firing_rates_mean_over_input_degrees = np.mean(firing_rates_mean_over_simulations, axis=0)\n",
     "firing_rates_std_over_input_degrees = np.mean(firing_rates_std_over_simulations, axis=0)\n",
@@ -899,10 +902,10 @@
     "fire_rate_pv_std = [fire_rate_std_by_weight[3] for fire_rate_std_by_weight in firing_rates_std_over_input_degrees]\n",
     "\n",
     "# Plot firing rate\n",
-    "axs[0].errorbar(xticks, fire_rate_cs_mean, fmt='b', yerr=fire_rate_cs_std, label='CS', elinewidth=2)\n",
-    "axs[0].errorbar(xticks, fire_rate_cc_mean, fmt='r', yerr=fire_rate_cc_std, label='CC', elinewidth=2)\n",
-    "axs[0].errorbar(xticks, fire_rate_sst_mean, fmt='g', yerr=fire_rate_sst_std, label='SST', elinewidth=2)\n",
-    "axs[0].errorbar(xticks, fire_rate_pv_mean, fmt='y', yerr=fire_rate_pv_std, label='PV', elinewidth=2)\n",
+    "axs[0].errorbar(xticks, fire_rate_cs_mean, fmt='b', yerr=fire_rate_cs_std, label='CS', transform=trans1+axs[0].transData, elinewidth=2)\n",
+    "axs[0].errorbar(xticks, fire_rate_cc_mean, fmt='r', yerr=fire_rate_cc_std, label='CC', transform=trans2+axs[0].transData, elinewidth=2)\n",
+    "axs[0].errorbar(xticks, fire_rate_sst_mean, fmt='g', yerr=fire_rate_sst_std, label='SST', transform=trans3+axs[0].transData, elinewidth=2)\n",
+    "axs[0].errorbar(xticks, fire_rate_pv_mean, fmt='y', yerr=fire_rate_pv_std, label='PV', transform=trans4+axs[0].transData, elinewidth=2)\n",
     "axs[0].set_xticks(xticks)\n",
     "axs[0].set_xticklabels(cc_cs_weights)\n",
     "axs[0].set_xlabel('Scalar of CC_CS connection')\n",

notebooks/layer5_SST_Soma_selectivity.ipynb

@@ -852,8 +852,10 @@
     "fig, axs = plt.subplots(1, 2, figsize=(18, 6))\n",
     "xticks = np.linspace(0, len(sst_soma_conn_weights)-1, len(sst_soma_conn_weights))\n",
     "\n",
-    "trans1 = Affine2D().translate(-0.1, 0.0)\n",
-    "trans2 = Affine2D().translate(+0.0, 0.0)\n",
+    "trans1 = Affine2D().translate(-0.2, 0.0)\n",
+    "trans2 = Affine2D().translate(-0.1, 0.0)\n",
+    "trans3 = Affine2D().translate(+0.0, 0.0)\n",
+    "trans4 = Affine2D().translate(+0.1, 0.0)\n",
     "\n",
     "firing_rates_mean_over_input_degrees = np.mean(firing_rates_mean_over_simulations, axis=0)\n",
     "firing_rates_std_over_input_degrees = np.mean(firing_rates_std_over_simulations, axis=0)\n",
@@ -868,10 +870,10 @@
     "fire_rate_pv_std = [fire_rate_std_by_weight[3] for fire_rate_std_by_weight in firing_rates_std_over_input_degrees]\n",
     "\n",
     "# Plot firing rate\n",
-    "axs[0].errorbar(xticks, fire_rate_cs_mean, fmt='b', yerr=fire_rate_cs_std, label='CS')\n",
-    "axs[0].errorbar(xticks, fire_rate_cc_mean, fmt='r', yerr=fire_rate_cc_std, label='CC')\n",
-    "axs[0].errorbar(xticks, fire_rate_sst_mean, fmt='g', yerr=fire_rate_sst_std, label='SST')\n",
-    "axs[0].errorbar(xticks, fire_rate_pv_mean, fmt='y', yerr=fire_rate_pv_std, label='PV')\n",
+    "axs[0].errorbar(xticks, fire_rate_cs_mean, fmt='b', yerr=fire_rate_cs_std, label='CS', transform=trans1+axs[0].transData, elinewidth=2)\n",
+    "axs[0].errorbar(xticks, fire_rate_cc_mean, fmt='r', yerr=fire_rate_cc_std, label='CC', transform=trans2+axs[0].transData, elinewidth=2)\n",
+    "axs[0].errorbar(xticks, fire_rate_sst_mean, fmt='g', yerr=fire_rate_sst_std, label='SST', transform=trans3+axs[0].transData, elinewidth=2)\n",
+    "axs[0].errorbar(xticks, fire_rate_pv_mean, fmt='y', yerr=fire_rate_pv_std, label='PV', transform=trans4+axs[0].transData, elinewidth=2)\n",
     "axs[0].set_xticks(xticks)\n",
     "axs[0].set_xticklabels(sst_soma_conn_weights)\n",
     "axs[0].set_xlabel('Scalar of SST->Soma connection')\n",