More Doxy Stuff

Fixed some stuff with the doxy files

Author: Patrick Rye

.gitignore

@@ -90,4 +90,4 @@ _start-cmd.bat
 .localconfig
 
 #Doxygen Stuff
-/project/doxygen/html/
+/html/

project/doxygen/Doxyfile

@@ -58,7 +58,7 @@ PROJECT_LOGO           = C:/Users/Patrick.Rye/Documents/GitHub/Cannon-Simulation
 # entered, it will be relative to the location where doxygen was started. If
 # left blank the current directory will be used.
 
-OUTPUT_DIRECTORY       = .
+OUTPUT_DIRECTORY       = ../../html
 
 # If the CREATE_SUBDIRS tag is set to YES then doxygen will create 4096 sub-
 # directories (in 2 levels) under the output directory of each output format and
@@ -68,7 +68,7 @@ OUTPUT_DIRECTORY       = .
 # performance problems for the file system.
 # The default value is: NO.
 
-CREATE_SUBDIRS         = NO
+CREATE_SUBDIRS         = YES
 
 # If the ALLOW_UNICODE_NAMES tag is set to YES, doxygen will allow non-ASCII
 # characters to appear in the names of generated files. If set to NO, non-ASCII
@@ -168,7 +168,7 @@ STRIP_FROM_INC_PATH    =
 # support long names like on DOS, Mac, or CD-ROM.
 # The default value is: NO.
 
-SHORT_NAMES            = NO
+SHORT_NAMES            = YES
 
 # If the JAVADOC_AUTOBRIEF tag is set to YES then doxygen will interpret the
 # first line (until the first dot) of a Javadoc-style comment as the brief
@@ -767,8 +767,8 @@ WARN_LOGFILE           = C:\Users\Patrick.Rye\Documents\GitHub\Cannon-Simulation
 
 INPUT                  = ../../src \
                          ../../ChangesLog.md \
-                         ../../README.md \
-                         ../../LICENSE.md
+                         ../../LICENSE.md \
+                         ../../README.md
 
 # This tag can be used to specify the character encoding of the source files
 # that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses
@@ -909,7 +909,7 @@ FILTER_SOURCE_PATTERNS =
 # (index.html). This can be useful if you have a project on for instance GitHub
 # and want to reuse the introduction page also for the doxygen output.
 
-USE_MDFILE_AS_MAINPAGE = 
+USE_MDFILE_AS_MAINPAGE = ../../README.md
 
 #---------------------------------------------------------------------------
 # Configuration options related to source browsing
@@ -922,7 +922,7 @@ USE_MDFILE_AS_MAINPAGE =
 # also VERBATIM_HEADERS is set to NO.
 # The default value is: NO.
 
-SOURCE_BROWSER         = NO
+SOURCE_BROWSER         = YES
 
 # Setting the INLINE_SOURCES tag to YES will include the body of functions,
 # classes and enums directly into the documentation.
@@ -1141,15 +1141,15 @@ HTML_EXTRA_FILES       =
 # Minimum value: 0, maximum value: 359, default value: 220.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_COLORSTYLE_HUE    = 227
+HTML_COLORSTYLE_HUE    = 210
 
 # The HTML_COLORSTYLE_SAT tag controls the purity (or saturation) of the colors
 # in the HTML output. For a value of 0 the output will use grayscales only. A
 # value of 255 will produce the most vivid colors.
 # Minimum value: 0, maximum value: 255, default value: 100.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_COLORSTYLE_SAT    = 19
+HTML_COLORSTYLE_SAT    = 67
 
 # The HTML_COLORSTYLE_GAMMA tag controls the gamma correction applied to the
 # luminance component of the colors in the HTML output. Values below 100
@@ -1160,7 +1160,7 @@ HTML_COLORSTYLE_SAT    = 19
 # Minimum value: 40, maximum value: 240, default value: 80.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_COLORSTYLE_GAMMA  = 147
+HTML_COLORSTYLE_GAMMA  = 60
 
 # If the HTML_TIMESTAMP tag is set to YES then the footer of each generated HTML
 # page will contain the date and time when the page was generated. Setting this
@@ -2019,7 +2019,8 @@ INCLUDE_FILE_PATTERNS  =
 # recursively expanded use the := operator instead of the = operator.
 # This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
 
-PREDEFINED             = WXUNUSED()=
+PREDEFINED             = WXUNUSED()= \
+                         DEFINED_BUILD_MODE_PRIVATE
 
 # If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then this
 # tag can be used to specify a list of macro names that should be expanded. The
@@ -2103,7 +2104,7 @@ PERL_PATH              = /usr/bin/perl
 # powerful graphs.
 # The default value is: YES.
 
-CLASS_DIAGRAMS         = YES
+CLASS_DIAGRAMS         = NO
 
 # You can define message sequence charts within doxygen comments using the \msc
 # command. Doxygen will then run the mscgen tool (see: