@@ -16,7 +16,7 @@ The APR is an adaptive image representation designed primarily for large 3D fluo
1616
1717| Pixels | APR |
1818| :--: | :--: |
19- | ![ img .png] ( ./ docs/images/pix_joined.png) | ![ img .png] ( . /docs/images/apr_joined.png) |
19+ | ![ pixels .png] ( https://github.com/AdaptiveParticles/pyapr/raw/master/ docs/images/pix_joined.png) | ![ apr .png] ( https://github.com/AdaptiveParticles/pyapr/raw/master /docs/images/apr_joined.png) |
2020| Uniform sampling | Adaptive sampling |
2121
2222* [ image source] ( https://bbbc.broadinstitute.org/bbbc/BBBC032 ) ,
@@ -47,7 +47,7 @@ apr, parts = pyapr.converter.get_apr(img)
4747pyapr.io.write(' my_image.apr' , apr, parts)
4848```
4949
50- ![ img .png] ( . /docs/images/apr_file.png)
50+ ![ apr_file .png] ( https://github.com/AdaptiveParticles/pyapr/raw/master /docs/images/apr_file.png)
5151
5252To return to the pixel representation:
5353``` python
@@ -65,18 +65,18 @@ apr, parts = pyapr.io.read('my_image.apr')
6565# launch viewer
6666pyapr.viewer.parts_viewer(apr, parts)
6767```
68- ![ img .png] ( . /docs/images/view_apr.png)
68+ ![ view_apr .png] ( https://github.com/AdaptiveParticles/pyapr/raw/master /docs/images/view_apr.png)
6969
7070The ` View Level ` toggle allows you to see the adaptation (brighter = higher resolution).
7171
72- ![ img .png] ( . /docs/images/view_level.png)
72+ ![ view_level .png] ( https://github.com/AdaptiveParticles/pyapr/raw/master /docs/images/view_level.png)
7373
7474Or view the result in 3D using APR-native maximum intensity projection raycast (cpu).
7575``` python
7676# launch raycast viewer
7777pyapr.viewer.raycast_viewer(apr, parts)
7878```
79- ![ img .png] ( . /docs/images/raycast.png)
79+ ![ raycast .png] ( https://github.com/AdaptiveParticles/pyapr/raw/master /docs/images/raycast.png)
8080
8181See the [ demo scripts] for more examples.
8282
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